Unable To Download Fiji Imagej On Mac

Download ImageJ for Mac OS X from the Download page. The ZIP file you download (Image1.xx.zip) should automatically expand to Image.app, which is normally copied into the Applications folder. If the 'ImageJ' window is too small, set 'GUI scale' in the EditOptionsAppearance dialog to. Yes, the amount of memory available can be increased, up to a limit. It is not a good idea to increase above 3/4 of the physical memory available, nor should memory be increased on Mac OS 9 or earlier in most cases (but see the Mac OS 9 details below). For rather technical reasons, Java applications such as ImageJ have a memory usage maximum that is set when the program is launched. ImageJ/Fiji plugin to analyze 2D and 3D skeleton images Java GPL-3.0 16 12 1 0 Updated Sep 28, 2020. Kappa A Fiji plugin for Curvature Analysis Jupyter Notebook MIT 0 0 7 0 Updated Sep 15, 2020. Image5D A plugin to extend image stacks to 5 dimensions: x, y, channel (color), slice (z), frame (t). Download the latest release of the plugin (1.2.1) The ZIP file is a plugin for ImageJ or Fiji. It contains all the necessary libraries (JAR files) to load and run TensorFlow models on any OS: Windows, Mac OSX, Linux. One-click Installation: Unzip the ZIP file and drag-and-drop the 5 JAR files into ImageJ or Fiji. DeepImageJ for CPU. Fiji is a free and open-source project that stands for Fiji is Just ImageJ. If you are familiar with Linux: ImageJ was the kernel and Fiji would be a distribution. Moreover, Fiji enhances ImageJ by shipping with comprehensive documentation and a set of plugins in a coherent menu structure.

  • 5Other downloads
    • 5.2Life-Line Fiji versions

Fiji is a distribution of ImageJ which includes many useful plugins contributed by the community.

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~ Download Fiji for your OS ~
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64-bit

macOS

64-bit
Other downloads


Fiji is supported on the following systems:

  • Windows XP, Vista, 7, 8 and 10
  • Mac OS X 10.8 'Mountain Lion' or later
  • Linux on amd64 and x86 architectures

However, Fiji (like ImageJ) should run on any system for which a Java 8 runtime is available (Solaris, Raspbian, etc.).


Packages for Debian / Ubuntu

We used to offer Debian packages of Fiji. Unfortunately, for a variety of reasons, we are withdrawing support for these packages until such time as someone is able to maintain them properly, so please switch to using the Linux downloads above instead.

If you are a Debian packaging expert who would like to address this situation, we would love to have your help—please join us in chat or on the forum.

Fiji is distributed as a portable application. That means that you do not have to run an installer; just download, unpack and start it.

  • Many common questions are answered on the FAQ.
  • If you encounter bugs, please see the Getting Help page.

See the source code page for details on obtaining the Fiji source code.

Archive

You can download previous Fiji builds by date stamp from the archive.

Life-Line Fiji versions

This sections offers older downloads of Fiji, preserved just prior to introducing major changes. The idea is that if something goes horribly wrong, you can fall back to a stable version.

Java 8

Here are Life-Line versions of Fiji created after the switch to Java 8.

Date Downloads Description
64-bit 32-bit macOS 64-bit 32-bit no-JRE
2017 May 30 Just prior to a sweeping update to nearly all components.

Java 6

Here are Life-Line versions from before Fiji switched to Java 8.

Date Downloads Description
64-bit 32-bit macOS 64-bit 32-bit no-JRE
2017 May 30 The final version of Fiji using Java 6, for all platforms.
2015 December 22 Just prior to starting the transition to Java 8.
2014 November 25 Just prior to a big update to facilitate reproducible builds.
2014 June 02 Just prior to some big changes to ImageJ2 under the hood.
2013 July 15 Just prior to extensive changes reconciling Fiji with ImageJ2.

See also

  • https://downloads.imagej.net/fiji/ for early versions of Fiji, and other miscellany.
  • The main Downloads page, for a version of ImageJ without the Fiji extensions.
Fiji
Platforms
MacOS
Error creating thumbnail: Unable to save thumbnail to destination
Think different.
macOS (formerly called Mac OS X, then OS X) is Apple's desktop operating system. It is the second most common desktop computing platform after Windows. This page details issues specific to using ImageJ on macOS systems.


  • 2Troubleshooting
    • 2.1ImageJ becomes very slow after running for a while
  • 3Frequently Asked Questions

See also the Java 8 page for OS-X-specific issues.

See also the Troubleshooting page.

ImageJ becomes very slow after running for a while

There are several reasons ImageJ can run slowly on macOS.

Java painting bug

On OS X, older versions of Java 8 (prior to 1.8.0_45)—as well as all versions of Java 7 (including 1.7.0_80)—are extremely slow at displaying images. You should either upgrade to the latest version of Java 8, or revert to Java 6 (see 'Frequently Asked Questions' below).

Window menu bar bug

There is a bug in Java 8 on MacOS which causes the application to drastically slow down as many windows are opened and closed over time. Make sure you are using the latest version of Java 8, as well as the latest version of ImageJ.

App Nap

On recent versions of OS X—10.9 'Mavericks' and later—there is an 'App Nap' feature which dramatically slows down applications that are not in the foreground. Leave ImageJ in the foreground while it is processing to avoid this issue. (There are also variousways to disable App Nap on your machine, but we have not had much success with them. If you find a solution that works, allowing ImageJ to run fast in the background, please tell us on the forum!)

No title bar in file chooser dialogs

On macOS 10.11 'El Capitan' and later, the operating system no longer includes a title bar for file chooser dialogs. See e.g. this JDK bug discussing the issue.

Unable To Download Fiji Imagej On Mac Computer

As a workaround, you can check 'Use JFileChooser to open/save' in the Edit Options Input/Output... dialog.

Fiji Imagej software, free download

See also the Frequently Asked Questions page.

How do I run ImageJ with Java 6?

It is unfortunately no longer feasible to install Apple Java 6 on current versions of macOS. However, ImageJ should work OK with Java 8. If you have difficulties, please post on the Image.sc Forum.

At any time, you can verify which Javas are installed on your system using this script.

How do I run ImageJ on Yosemite?

Install the Java 8 JRE or Java SE 8.

Unable To Download Fiji Imagej On Mac Download

How do I run ImageJ on El Capitan?

Unfortunately, El Capitan has some new java-related issues. If you upgraded to El Capitan and your Java 8 installation is not being detected properly:

Imagej Software Fiji

  1. Try installing the Java SE JDK.
  2. If that does not work, see this guide for steps which could get things working again.
  3. Alternately, ImageJ still works on El Capitan with Java 6 (see above).